STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C824_00614GFO_IDH_MocA domain-containing protein. (328 aa)    
Predicted Functional Partners:
C824_03759
AP_endonuc_2 domain-containing protein.
  
 
  0.835
iolE
Inosose dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).
  
 
  0.835
C824_02416
GFO_IDH_MocA domain-containing protein.
  
     0.725
C824_04474
GFO_IDH_MocA domain-containing protein.
  
     0.686
C824_04476
Uncharacterized protein.
  
  
  0.653
C824_00615
Thioredoxin domain-containing protein.
       0.594
C824_01495
GFO_IDH_MocA domain-containing protein.
  
  
  0.585
C824_05643
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.583
C824_04909
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
  
 0.576
C824_04908
5-deoxy-glucuronate isomerase.
  
  
 0.570
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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