STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C824_00698Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
C824_00696
Uncharacterized protein.
  
 
 0.974
C824_00695
Baseplate_J domain-containing protein.
  
  
 0.933
C824_00699
LysM domain-containing protein.
  
  
 0.931
C824_00694
Phage tail protein I.
  
  
 0.928
C824_00697
Uncharacterized protein.
  
  
 0.923
C824_00700
Uncharacterized protein.
  
  
 0.923
C824_00704
Uncharacterized protein.
  
 
 0.848
C824_00703
Phage major tail tube protein.
  
  
 0.790
C824_00701
Phage tail tape measure protein, TP901 family, core region.
       0.785
C824_03373
Uncharacterized protein.
  
 
 0.782
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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