STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C824_00817Oligo-1,6-glucosidase. (569 aa)    
Predicted Functional Partners:
C824_02685
PTS system, glucose subfamily, IIA component.
  
 
 0.942
C824_02169
Uncharacterized protein.
  
 
 0.826
C824_02686
PTS system, N-acetylglucosamine-specific IIBC component.
  
 
 0.826
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.777
C824_00818
HTH araC/xylS-type domain-containing protein.
  
    0.763
C824_02998
Uncharacterized protein.
 
 
0.756
C824_01214
Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
 
 
0.749
C824_03133
4-alpha-glucanotransferase.
 
 
 0.718
C824_02689
Uncharacterized protein.
     
 0.679
C824_02688
CBM_X domain-containing protein.
     
 0.676
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.