Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C824_00379 | C824_00911 | Amino acid adenylation domain-containing protein. | FAD-dependent oxidoreductase. | 0.724 |
C824_00379 | C824_01950 | Amino acid adenylation domain-containing protein. | Rieske domain-containing protein. | 0.451 |
C824_00379 | C824_03002 | Amino acid adenylation domain-containing protein. | Condensation domain-containing protein. | 0.999 |
C824_00911 | C824_00379 | FAD-dependent oxidoreductase. | Amino acid adenylation domain-containing protein. | 0.724 |
C824_00911 | C824_00912 | FAD-dependent oxidoreductase. | TRAP transporter large permease. | 0.516 |
C824_00911 | C824_00913 | FAD-dependent oxidoreductase. | TRAP transporter small permease. | 0.519 |
C824_00911 | C824_00915 | FAD-dependent oxidoreductase. | Uncharacterized protein. | 0.807 |
C824_00911 | C824_01121 | FAD-dependent oxidoreductase. | Phosphatase PAP2 family protein. | 0.672 |
C824_00911 | C824_01950 | FAD-dependent oxidoreductase. | Rieske domain-containing protein. | 0.895 |
C824_00911 | C824_02152 | FAD-dependent oxidoreductase. | Uncharacterized protein; Belongs to the FPP/GGPP synthase family. | 0.636 |
C824_00911 | C824_03002 | FAD-dependent oxidoreductase. | Condensation domain-containing protein. | 0.693 |
C824_00911 | C824_05410 | FAD-dependent oxidoreductase. | Uncharacterized protein. | 0.645 |
C824_00911 | C824_05485 | FAD-dependent oxidoreductase. | Uncharacterized protein. | 0.527 |
C824_00912 | C824_00911 | TRAP transporter large permease. | FAD-dependent oxidoreductase. | 0.516 |
C824_00912 | C824_00913 | TRAP transporter large permease. | TRAP transporter small permease. | 0.951 |
C824_00913 | C824_00911 | TRAP transporter small permease. | FAD-dependent oxidoreductase. | 0.519 |
C824_00913 | C824_00912 | TRAP transporter small permease. | TRAP transporter large permease. | 0.951 |
C824_00915 | C824_00911 | Uncharacterized protein. | FAD-dependent oxidoreductase. | 0.807 |
C824_00915 | C824_05485 | Uncharacterized protein. | Uncharacterized protein. | 0.416 |
C824_01121 | C824_00911 | Phosphatase PAP2 family protein. | FAD-dependent oxidoreductase. | 0.672 |
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