STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C824_00947Phosphoadenosine phosphosulfate reductase. (317 aa)    
Predicted Functional Partners:
C824_03141
Pyruvate:ferredoxin (Flavodoxin) oxidoreductase.
  
 
 0.986
C824_01504
[FeFe] hydrogenase, group A.
   
 0.983
C824_02313
[FeFe] hydrogenase, group A.
   
 0.983
C824_03837
Uncharacterized protein.
 
 0.977
C824_01730
Uncharacterized protein.
  
 
 0.953
C824_02314
NADH-quinone oxidoreductase subunit F.
    
 0.952
C824_01674
Uncharacterized protein.
  
 
 0.949
rnfB
Ion-translocating oxidoreductase complex subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.947
C824_03836
Uncharacterized protein.
  
 
 0.945
C824_00948
DUF4007 domain-containing protein.
 
     0.944
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.