STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C824_03880Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
C824_04356
Uncharacterized protein.
  
     0.774
C824_03916
N-acetylneuraminate lyase.
 
  
 0.684
C824_03879
HTH araC/xylS-type domain-containing protein.
 
     0.677
C824_03917
Solute:sodium symporter (SSS) family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.660
C824_03919
Uncharacterized protein.
 
 
  0.522
C824_03878
Uncharacterized protein.
 
     0.491
C824_03881
Uncharacterized protein.
       0.483
C824_05910
Beta-galactosidase.
 
 
  0.463
C824_04917
Beta-galactosidase.
 
 
  0.460
C824_03873
Uncharacterized protein.
 
     0.451
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.