STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsARibose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (498 aa)    
Predicted Functional Partners:
C824_04093
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family.
  0.980
C824_04095
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family.
  0.965
C824_01931
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family.
  0.957
C824_05384
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family.
  0.944
C824_05606
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family.
  0.921
C824_05607
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  0.907
C824_04092
Peripla_BP_4 domain-containing protein.
 0.902
C824_03762
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family.
  0.889
C824_01930
Uncharacterized protein; Belongs to the binding-protein-dependent transport system permease family.
  0.878
C824_00082
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
   
 0.876
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.