STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C824_04370Carbon-monoxide dehydrogenase small subunit. (168 aa)    
Predicted Functional Partners:
C824_04371
Xanthine dehydrogenase FAD-binding subunit.
 0.999
C824_04372
Xanthine dehydrogenase molybdenum-binding subunit.
 0.999
C824_01672
Selenium-dependent molybdenum hydroxylase 1.
 
0.992
C824_02423
NTP_transf_3 domain-containing protein.
 
 
 0.902
C824_00444
Xanthine dehydrogenase accessory protein XdhC.
 
 
 0.887
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
    
  0.850
C824_02905
Guanine deaminase.
 
 
  0.847
C824_01942
Hydroxyatrazine ethylaminohydrolase.
 
 
  0.842
C824_00490
Purine-nucleoside phosphorylase.
     
  0.830
C824_01512
Purine nucleoside phosphorylase.
     
  0.830
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.