STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C824_05121Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (272 aa)    
Predicted Functional Partners:
C824_05228
Flagellar motor switch protein FliN.
 
 
 0.974
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.966
C824_05251
Flagellar protein FliS.
  
 
 0.964
fliI
Flagellar protein export ATPase FliI.
 
 
 0.948
flgK
Flagellar hook-associated protein 1.
 
  
 0.942
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.936
C824_05236
Flagellar basal body protein.
 
 
 0.931
fliG
Flagellar motor switch protein FliG.
 
  
 0.930
C824_05225
Flagellar motor switch protein FliM.
 
  
 0.930
C824_05213
Flagellar M-ring protein FliF.
 
  
 0.929
Your Current Organism:
Schaedlerella arabinosiphila
NCBI taxonomy Id: 2044587
Other names: Clostridiaceae bacterium DSM 106076, Clostridiales bacterium TLL-A1, Clostridium sp. ASF502, DSM 106076, KCTC 15657, S. arabinosiphila, Schaedlerella arabinosiphila Soh et al. 2019, personal::TLL-A1T, strain TLL-A1T
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