STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18004.1MCE-family protein Mce1F. (446 aa)    
Predicted Functional Partners:
AIY15735.2
MCE-family protein MceC.
 
  
 0.984
yrbE4A
Conserved hypothetical integral membrane protein YrbEA.
 
 
 0.977
AIY19637.2
Conserved hypothetical integral membrane protein YrbEB.
 
 
 0.965
AJR18002.1
MCE-family protein MceD.
 
  
 0.962
AIY19638.2
MCE-family protein MceB.
 
  
 0.957
AJR18168.1
Methionine ABC transporter ATP-binding protein.
 
 
 0.956
AJR18001.1
MCE-family protein MceA.
 
   
 0.954
AJR18006.1
Hypothetical protein.
 
    0.943
AJR18005.1
Hypothetical protein.
 
    0.936
AJR18003.1
MCE-family lipoprotein LprK (MCE-family lipoprotein Mce1e).
  
0.875
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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