STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY15989.1Methionine ABC transporter ATP-binding protein. (231 aa)    
Predicted Functional Partners:
AIY15988.1
Nucleoside ABC transporter, permease protein 2.
 
 
 0.994
AIY18316.1
Cell division protein FtsX.
 
 0.974
AIY15896.2
Putative ABC transport system integral membrane protein.
 
 
 0.941
AIY19329.1
Protein of unknown function DUF214.
 
 0.933
AIY19308.2
Oligopeptide transport system permease protein OppB; Belongs to the ABC transporter superfamily.
 
   
0.903
AIY18194.2
Oligopeptide transport system permease protein OppB; Belongs to the ABC transporter superfamily.
 
    
0.897
AIY18582.1
ABC transporter permease protein.
 
 
 0.807
AIY17561.1
Putative ABC transporter integral membrane protein.
 
  
 0.785
AIY19628.1
ABC amino acid transporter, permease component.
 
 
  
 0.682
AIY19681.2
Two-component system sensor kinase.
  
    0.679
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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