STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16047.1CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase. (1190 aa)    
Predicted Functional Partners:
AIY16045.1
Putative capsular polysaccharide biosynthesis protein,Glycosyl Transferase Family 2, YveT.
 
 
0.961
AIY19687.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.831
tagD2
Glycerol-3-phosphate cytidylyltransferase.
 
  
 0.821
AIY16048.1
Hypothetical protein.
     
 0.778
AIY16049.1
Hypothetical protein.
       0.773
AIY18120.1
Glycerol-3-phosphate cytidylyltransferase.
 
  
 0.760
AIY20121.2
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.756
AIY18448.1
Teichoic acid export ATP-binding protein TagH.
 
 
 0.734
AIY16046.1
Beta-1,3-glucosyltransferase.
 
  
0.715
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
 
 
 0.699
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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