STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY19726.2Hypothetical protein. (214 aa)    
Predicted Functional Partners:
AJR18349.1
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.
  
  
 0.759
AIY16281.1
Large-conductance mechanosensitive channel.
       0.708
AJR18016.1
Septum site-determining protein MinD.
 
   
 0.707
AIY19648.2
Putative conserved alanine rich membrane protein.
 
  
 0.678
AIY19864.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
  
  
 0.677
AIY15788.2
Integral membrane protein.
 
  
 0.604
AJR18347.1
Hypothetical protein.
  
  
 0.561
AIY17154.1
Hypothetical protein.
  
  
 0.561
AIY19339.1
Hypothetical protein.
  
     0.558
AIY16282.2
Hypothetical protein.
       0.550
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.