STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnCTranscriptional regulator, AsnC family. (336 aa)    
Predicted Functional Partners:
AJR18144.1
TPR repeat.
       0.556
AIY16292.2
Glycosyl transferase, group 2 family protein.
       0.556
AJR18145.1
Glutamine amidotransferase, class I.
       0.488
AIY16294.1
Hypothetical protein.
       0.444
AIY16295.2
Putative solute binding protein of ABC transporter system.
       0.444
AJR18146.1
Polar amino acid ABC transporter, inner membrane subunit.
       0.436
AIY19729.2
Glutamine ABC transporter, ATP-binding protein GlnQ.
       0.436
AIY16296.1
Aldehyde dehydrogenase.
  
  
 0.429
AJR18143.1
Phage tail fiber protein.
       0.413
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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