STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16352.2Oxidoreductase, short chain dehydrogenase/reductase family. (264 aa)    
Predicted Functional Partners:
AIY18035.1
Threonine dehydrogenase-related Zn-dependent dehydrogenase.
 
  
 0.669
AIY16354.1
Manganese transport protein MntH.
  
  
 0.640
AJR18547.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.627
AJR18161.1
Hypothetical protein.
       0.625
AJR18162.1
Hypothetical protein.
       0.625
AIY19733.2
Hypothetical protein.
       0.625
AIY16353.2
Hypothetical protein.
       0.625
AJR18163.1
Hypothetical protein.
       0.625
AIY16355.1
Hypothetical protein.
       0.617
AIY16226.1
Hypothetical protein.
  
 
   0.603
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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