STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY19738.2Hypothetical protein. (161 aa)    
Predicted Functional Partners:
AIY15681.1
Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.676
AJR18326.1
Putative linoleoyl-coa desaturase (delta(6)-desaturase).
 
  
 0.665
acd_4
acyl-CoA dehydrogenase, Mycobacterial subgroup FADE23.
 
  
 0.663
ephC
Epoxide hydrolase.
     
 0.605
AIY19073.1
Putative linoleoyl-coa desaturase (delta(6)-desaturase).
 
  
 0.599
AIY17044.1
Transcriptional regulator, TetR family.
  
     0.594
AIY17273.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.590
tam
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
       0.588
AIY15676.1
Phosphoglycerate mutase family protein.
 
     0.554
AIY16425.1
Protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
 
   
 0.544
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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