Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIY16457.2 | AIY16458.2 | KR76_06215 | KR76_06220 | GCN5-related N-acetyltransferase. | Cold shock protein CspC. | 0.519 |
AIY16458.2 | AIY16457.2 | KR76_06220 | KR76_06215 | Cold shock protein CspC. | GCN5-related N-acetyltransferase. | 0.519 |
AIY16458.2 | AIY16463.2 | KR76_06220 | KR76_06260 | Cold shock protein CspC. | SSU ribosomal protein S12p (S23e). | 0.532 |
AIY16458.2 | AIY17392.1 | KR76_06220 | KR76_12645 | Cold shock protein CspC. | Arogenate dehydrogenase. | 0.640 |
AIY16458.2 | AIY20233.2 | KR76_06220 | KR76_27645 | Cold shock protein CspC. | RNA-binding protein Jag. | 0.591 |
AIY16458.2 | rplO | KR76_06220 | KR76_21190 | Cold shock protein CspC. | LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.482 |
AIY16458.2 | rplV | KR76_06220 | KR76_21260 | Cold shock protein CspC. | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.554 |
AIY16458.2 | rpoA | KR76_06220 | KR76_21110 | Cold shock protein CspC. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.583 |
AIY16458.2 | rpoB | KR76_06220 | KR76_04590 | Cold shock protein CspC. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.502 |
AIY16458.2 | rpoZ | KR76_06220 | KR76_14625 | Cold shock protein CspC. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.584 |
AIY16458.2 | rpsO | KR76_06220 | KR76_10800 | Cold shock protein CspC. | SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.575 |
AIY16463.2 | AIY16458.2 | KR76_06260 | KR76_06220 | SSU ribosomal protein S12p (S23e). | Cold shock protein CspC. | 0.532 |
AIY16463.2 | rplO | KR76_06260 | KR76_21190 | SSU ribosomal protein S12p (S23e). | LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.996 |
AIY16463.2 | rplV | KR76_06260 | KR76_21260 | SSU ribosomal protein S12p (S23e). | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.996 |
AIY16463.2 | rpoA | KR76_06260 | KR76_21110 | SSU ribosomal protein S12p (S23e). | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
AIY16463.2 | rpoB | KR76_06260 | KR76_04590 | SSU ribosomal protein S12p (S23e). | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.983 |
AIY16463.2 | rpoZ | KR76_06260 | KR76_14625 | SSU ribosomal protein S12p (S23e). | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.887 |
AIY16463.2 | rpsO | KR76_06260 | KR76_10800 | SSU ribosomal protein S12p (S23e). | SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
AIY17392.1 | AIY16458.2 | KR76_12645 | KR76_06220 | Arogenate dehydrogenase. | Cold shock protein CspC. | 0.640 |
AIY20233.2 | AIY16458.2 | KR76_27645 | KR76_06220 | RNA-binding protein Jag. | Cold shock protein CspC. | 0.591 |
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