STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18215.1Serine protease inhibitor (serpin family); Belongs to the serpin family. (451 aa)    
Predicted Functional Partners:
AIY16718.1
Peptidase S1 and S6, chymotrypsin/Hap.
   
 0.626
AJR18143.1
Phage tail fiber protein.
  
     0.582
AIY16653.1
Putative membrane protein.
       0.572
AIY16130.1
Phage tail fiber protein.
  
     0.515
AIY18856.1
Ankyrin repeat.
  
 
 0.506
AJR18600.1
Putative RuBisCo-expression protein CbbX.
    
  0.496
AJR18217.1
Fibronectin type III domain protein.
 
     0.491
AIY19395.1
Peptidase, M13 family (pepO).
    
 0.488
AJR18018.1
Putative carboxypeptidase.
  
  
 0.485
AIY19674.2
Phage tail fiber protein.
  
     0.484
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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