STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16734.1Transcriptional regulator, TetR family. (186 aa)    
Predicted Functional Partners:
AIY19789.2
Antiseptic resistance protein.
 
   
 0.852
AIY16735.1
Hypothetical protein.
       0.709
AIY16736.1
SdrA.
       0.709
AIY16069.2
Transcriptional regulator, TetR family.
  
     0.704
AIY16733.1
UPF0301 protein YqgE; Belongs to the UPF0301 (AlgH) family.
  
    0.526
AJR18457.1
Fosmidomycin resistance protein.
 
     0.486
AIY17014.1
Hypothetical protein.
  
     0.480
AIY19944.2
Integral membrane protein.
 
     0.462
AJR18683.1
Arginine/ornithine antiporter ArcD.
  
     0.456
AIY20106.2
Vitamin K epoxide reductase.
  
     0.425
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.