STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY19789.2Antiseptic resistance protein. (499 aa)    
Predicted Functional Partners:
AIY16734.1
Transcriptional regulator, TetR family.
 
   
 0.852
AIY16982.2
Hypothetical protein.
  
   
 0.780
AIY16735.1
Hypothetical protein.
       0.716
AJR18695.1
Membrane transport protein.
  
   
 0.716
AIY16736.1
SdrA.
       0.709
AIY17056.1
MFS transporter.
  
   
 0.662
AIY16733.1
UPF0301 protein YqgE; Belongs to the UPF0301 (AlgH) family.
     
 0.537
AIY19344.1
Conserved protein with diacylglycerol kinase catalytic domain.
 
 0.417
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.