STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18236.1Transcriptional regulator, AraC family. (278 aa)    
Predicted Functional Partners:
AIY16753.1
Cysteine synthase B.
       0.773
AIY20012.2
Iron-chelator utilization protein.
  
  
 0.728
AIY16752.1
Molybdenum cofactor biosynthesis protein MoaD.
     
 0.716
AIY16751.1
Mov34/MPN/PAD-1 family protein.
       0.705
fepD_3
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.643
AJR18237.1
Iron compound ABC transporter, periplasmic iron compound-binding protein.
  
  
 0.626
AIY19365.1
Siderophore interacting protein.
  
  
 0.621
AIY18088.1
Iron-chelator utilization protein.
  
  
 0.608
fepG_2
ABC-type Fe3+-siderophore transport system, permease 2 component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.604
AIY18708.1
Iron-chelator utilization protein.
  
  
 0.597
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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