STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16832.1Methylsuccinyl-CoA dehydrogenase. (399 aa)    
Predicted Functional Partners:
AIY18171.1
Electron transfer flavoprotein, alpha subunit.
 
 0.773
AIY18172.2
Electron transfer flavoprotein, beta subunit.
 
 
 0.752
AIY17613.1
acyl-CoA dehydrogenase, Mycobacterial subgroup FADE27.
  
     0.735
AIY17083.1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.705
fadB
Short chain enoyl-CoA hydratase [isoleucine degradation]/3-hydroxyacyl-CoA dehydrogenase.
  
 0.692
AIY17659.1
acyl-CoA dehydrogenase, Mycobacterial subgroup FADE32.
  
     0.669
AIY15675.1
Putative acyl-coa dehydrogenase FADE36.
 
 
 0.631
AIY20186.2
Enoyl-CoA hydratase.
 
 0.613
AIY17088.1
Crotonyl-CoA carboxylase/reductase, ethylmalonyl-CoA producing.
 
 
 0.612
paaH
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.576
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.