STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16837.2Branched-chain amino acid ABC transporter, amino acid-binding protein. (499 aa)    
Predicted Functional Partners:
AJR18266.1
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.986
AJR18267.1
Branched-chain amino acid transport ATP-binding protein LivG.
 
  
 0.893
AIY16838.1
Branched-chain amino acid transport ATP-binding protein LivF.
 
  
 0.887
AIY16835.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
 
    
0.776
AIY16839.1
Collagen alpha 2(IV) chain precursor.
       0.772
AIY16840.2
Hypothetical protein.
       0.772
AJR18790.1
Branched-chain amino acid transport ATP-binding protein LivG; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.701
AIY17447.2
Dihydrodipicolinate reductase.
  
     0.646
AIY16957.1
Hypothetical protein.
  
     0.617
AIY19505.1
Saccharopine dehydrogenase.
  
     0.566
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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