STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16881.1Hypothetical protein. (440 aa)    
Predicted Functional Partners:
AIY16882.1
Hypothetical protein.
       0.832
AIY16883.2
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase; Belongs to the long-chain O-acyltransferase family.
       0.541
AJR18278.1
Hypothetical protein.
       0.504
AIY17812.1
Integral membrane protein (Rhomboid family).
  
     0.440
AJR18005.1
Hypothetical protein.
  
     0.427
AJR18380.1
MCE-family protein MceF.
  
     0.426
AIY17114.1
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.422
AJR18192.1
Hypothetical protein.
  
     0.413
AJR18296.1
Hypothetical protein.
  
     0.413
AJR18630.1
Cell envelope-related transcriptional attenuator.
  
     0.404
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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