STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
AIY16960.1Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type. (444 aa)    
Predicted Functional Partners:
AIY17233.1
Glutamate synthase [NADPH] large chain.
  
 
 0.999
AIY19141.1
2-polyprenylphenol hydroxylase-related flavodoxin oxidoreductase.
   
 0.916
AIY17114.1
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.895
AIY17803.1
Ferredoxin--sulfite reductase, actinobacterial type; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.816
cysH
Phosphoadenylyl-sulfate reductase [thioredoxin]; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.814
AIY19140.1
Hypothetical protein; Belongs to the cytochrome P450 family.
   
 0.803
AJR18476.1
Hypothetical protein.
  
  
 0.780
AIY16959.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.778
AIY16958.1
3-oxoacyl-[acyl-carrier protein] reductase.
     
 0.776
nuoF
NADH-ubiquinone oxidoreductase chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 
 0.748
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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