STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16962.1Phenylalanine-4-hydroxylase. (298 aa)    
Predicted Functional Partners:
AIY19467.1
Pterin-4-alpha-carbinolamine dehydratase.
  
 0.984
AIY20192.2
Prephenate dehydratase.
     
 0.911
pat
Biosynthetic Aromatic amino acid aminotransferase alpha, Aspartate aminotransferase.
     
 0.907
hisC_1
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.907
AIY18059.1
L-threonine 3-O-phosphate decarboxylase.
     
 0.907
AIY17842.2
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
     
 0.904
katG
Catalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
  0.900
AIY18480.2
Homogentisate 1,2-dioxygenase.
 
  
 0.833
AIY19129.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.808
AIY19322.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.808
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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