STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_23-oxoacyl-[acyl-carrier protein] reductase. (448 aa)    
Predicted Functional Partners:
AIY19888.2
Acyl dehydratase.
 
  0.964
AIY18300.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.946
fabH
3-oxoacyl-(acyl carrier protein) synthase.
 
 
 0.930
atoB_1
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.917
AIY17273.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
 
 0.572
acd_4
acyl-CoA dehydrogenase, Mycobacterial subgroup FADE23.
 
  0.570
fadB
Short chain enoyl-CoA hydratase [isoleucine degradation]/3-hydroxyacyl-CoA dehydrogenase.
 
 0.552
AIY16020.1
Acyl-coenzyme A oxidase 1, peroxisomal.
 
  0.544
AJR18326.1
Putative linoleoyl-coa desaturase (delta(6)-desaturase).
  
 
 
 0.513
AIY17732.1
Transcriptional regulator, TetR family.
 
     0.510
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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