STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY19928.2Hypothetical protein. (193 aa)    
Predicted Functional Partners:
AJR18430.1
Hypothetical protein.
       0.773
AIY17365.2
Protein of unknown function DUF664.
  
     0.693
AIY19053.1
Hypothetical protein.
 
     0.660
AIY17534.3
Glyoxalase.
 
   
 0.659
AJR18848.1
Hypothetical protein.
 
     0.659
AJR18129.1
Putative methyltransferase.
  
     0.487
AIY17260.1
Hypothetical protein.
 
     0.482
AIY17530.1
Hypothetical protein.
       0.481
AJR18429.1
Hypothetical protein.
       0.481
AIY15773.1
N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB.
  
   
 0.464
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.