STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY19956.2Hypothetical protein. (89 aa)    
Predicted Functional Partners:
AIY17095.2
GCN5-related N-acetyltransferase.
  
     0.620
AIY17506.1
Putative DeoR-family transcriptional regulator.
  
     0.568
AIY18335.2
DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.555
mshD
Acetyl-CoA:Cys-GlcN-Ins acetyltransferase, mycothiol synthase MshD; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
 
     0.518
AIY17476.1
Putative peptidase.
  
     0.516
AIY20060.2
Hypothetical protein.
  
  
 0.486
AIY18388.1
Methionine synthase, vitamin-B12 independent, putative.
  
   
 0.485
AIY18747.1
Uncharacterized protein Q1 colocalized with Q.
  
   
 0.481
AIY17137.1
Putative cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.472
AIY18050.1
Hypothetical protein.
  
     0.455
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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