Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hmdHistamine dehydrogenase. (690 aa)    
Predicted Functional Partners:
AIY17898.1
Agmatine/putrescine antiporter, associated with agmatine catabolism.
 
   
 0.815
AIY17899.2
Aldehyde dehydrogenase.
 
  
 0.767
AJR18496.1
Monooxygenase, putative.
 
   
 0.723
AIY17891.2
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.701
AIY18171.1
Electron transfer flavoprotein, alpha subunit.
   
 
 0.694
AIY17895.1
Bona fide RidA/YjgF/TdcF/RutC subgroup.
 
  
 0.684
AIY17894.1
Major pilin protein fimA.
 
     0.683
AIY19524.1
Flavin oxidoreductase.
  
  
 0.652
nfo
Endonuclease IV.
  
  
 0.651
AIY19549.1
Transcriptional regulator, TetR family.
  
  
 0.645
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.