STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY17982.12,4-dienoyl-CoA reductase [NADPH]. (414 aa)    
Predicted Functional Partners:
AIY17541.1
Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase.
    
 0.870
AJR18521.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.842
ksdD
3-ketosteroid-delta1-dehydrogenase.
 
      0.750
AIY15724.2
3-ketosteroid-delta-1-dehydrogenase.
    
 0.673
AIY15933.1
3-ketosteroid-delta-1-dehydrogenase.
    
 0.570
AJR18520.1
Transcriptional regulator, TetR family.
  
    0.565
AIY17665.3
3-ketosteroid-delta-1-dehydrogenase.
    
 0.562
AIY20168.2
Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase.
    
 0.505
AIY18784.1
CarD-like transcriptional regulator.
  
    0.454
AIY17981.1
Hypothetical protein.
       0.435
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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