STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY18099.2Sensor histidine kinase. (376 aa)    
Predicted Functional Partners:
desR
Putative two-component system response regulator.
 0.998
AIY17654.1
Putative two-component system response regulator.
 0.987
AIY18100.1
Putative membrane protein.
  
 0.978
AIY18101.1
Methionine ABC transporter ATP-binding protein.
  
 0.948
AIY17653.1
Sensor histidine kinase.
  
  
 
0.926
narL
Two-component system, regulatory protein.
 
 
 0.701
AIY16756.1
Putative two-component system response regulator.
 
 0.630
AIY15990.1
DNA-binding response regulator, LuxR family.
 
 0.629
AIY15650.1
Putative two-component system response regulator.
 
 0.620
AIY18038.2
Putative two-component system response regulator.
 
   0.614
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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