STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18600.1Putative RuBisCo-expression protein CbbX. (514 aa)    
Predicted Functional Partners:
AJR18601.1
Hypothetical protein.
 
     0.954
AIY18345.1
Serine/threonine protein kinase.
 
     0.950
AIY18343.1
Hypothetical protein.
 
 
 
 0.949
AIY18344.1
Hypothetical protein.
 
     0.948
AJR18598.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
 
 0.934
AIY18347.1
Tellurite resistance protein; Belongs to the TelA family.
 
     0.920
AJR18599.1
Secreted protein.
 
     0.895
AIY18346.1
Glutamine ABC transporter, periplasmic glutamine-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
     0.852
AIY17873.2
Hypothetical protein.
  
 0.832
AIY20039.2
Hypothetical protein.
       0.832
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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