STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18600.1Putative RuBisCo-expression protein CbbX. (514 aa)    
Predicted Functional Partners:
AJR18598.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
 
 0.951
AJR18601.1
Hypothetical protein.
 
     0.951
AIY18343.1
Hypothetical protein.
 
 
 
 0.949
AIY18344.1
Hypothetical protein.
 
     0.948
AIY18345.1
Serine/threonine protein kinase.
 
     0.947
AIY18347.1
Tellurite resistance protein; Belongs to the TelA family.
 
     0.915
AJR18599.1
Secreted protein.
 
     0.890
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.873
AIY18346.1
Glutamine ABC transporter, periplasmic glutamine-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
     0.837
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  0.829
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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