STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18622.1Sensor histidine kinase MtrB. (584 aa)    
Predicted Functional Partners:
AIY18432.1
Two component sensory transduction transcriptional regulatory protein MtrA.
 
 0.980
lpqB
LpqB.
    0.904
AIY19325.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 0.887
mprA
Putative two-component system response regulator.
 
 0.881
AIY18791.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 0.861
AIY19539.1
Putative two-component system response regulator.
 
 0.855
AIY19425.2
Putative two-component system response regulator.
 
 0.823
AIY19026.1
Sensor histidine kinase.
 
 0.816
AIY18319.2
Putative two-component system response regulator.
 
 0.810
tcrA
DNA-binding heavy metal response regulator.
 
 0.810
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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