Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AJR18625.1Membrane protein, putative. (355 aa)    
Predicted Functional Partners:
AIY20121.2
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.681
AJR18624.1
Membrane protein, putative.
       0.651
AIY16045.1
Putative capsular polysaccharide biosynthesis protein,Glycosyl Transferase Family 2, YveT.
 
  
 0.607
manB
Phosphomannomutase.
       0.542
AJR18626.1
Protein YcaR in KDO2-Lipid A biosynthesis cluster; Belongs to the UPF0434 family.
       0.529
AIY18438.1
Transcriptional regulators.
       0.529
AIY20156.2
Glycosyl transferase, family 2; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.526
AIY16047.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.516
AIY16298.1
Hypothetical protein.
  
  
 0.505
AIY19687.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.478
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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