STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18625.1Membrane protein, putative. (355 aa)    
Predicted Functional Partners:
AIY20121.2
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.813
AJR18624.1
Membrane protein, putative.
       0.651
AIY16045.1
Putative capsular polysaccharide biosynthesis protein,Glycosyl Transferase Family 2, YveT.
 
  
 0.596
manB
Phosphomannomutase.
       0.544
AJR18626.1
Protein YcaR in KDO2-Lipid A biosynthesis cluster; Belongs to the UPF0434 family.
       0.529
AIY18438.1
Transcriptional regulators.
       0.529
AIY16298.1
Hypothetical protein.
  
  
 0.520
AIY20156.2
Glycosyl transferase, family 2; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.517
AIY16047.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.502
AIY17932.1
Transport ATP-binding protein CydCD.
 
  
 0.484
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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