STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY18836.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
AIY18835.1
Ferredoxin reductase.
       0.773
AIY18833.2
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative.
       0.540
AIY18834.1
20-beta-hydroxysteroid dehydrogenase.
       0.540
AIY20118.2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.540
fabG_6
3-oxoacyl-[acyl-carrier protein] reductase.
       0.473
AIY18828.1
Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1).
       0.470
AIY18829.1
Choline-sulfatase.
       0.470
AIY18830.1
Hypothetical protein.
       0.470
AIY18831.2
Putative integral membrane protein.
       0.470
AIY18837.1
Hypothetical protein.
       0.406
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.