STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY19118.1Putative integral membrane protein. (300 aa)    
Predicted Functional Partners:
AIY19117.1
Putative membrane protein.
       0.768
AJR18758.1
Hypothetical protein.
       0.752
AJR18759.1
Hypothetical protein.
       0.532
AJR18217.1
Fibronectin type III domain protein.
  
     0.466
AIY19116.1
Pyruvate dehydrogenase E1 component beta subunit.
       0.449
pdhA
Pyruvate dehydrogenase E1 component alpha subunit.
       0.449
AIY19114.1
Hypothetical protein.
       0.438
AIY19115.1
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
       0.438
AJR18760.1
PxORF73 peptide.
       0.429
AJR18761.1
Putative membrane protein.
       0.429
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.