STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN99695.1Nucleotidyltransferase substrate-binding protein; Identified by match to protein family HMM PF08780; match to protein family HMM TIGR01987. (140 aa)    
Predicted Functional Partners:
ACN98170.1
DNA polymerase, beta domain protein region.
 
     0.835
ACN99143.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07282; match to protein family HMM TIGR01766.
       0.773
ACN99558.1
Nucleotidyltransferase; Identified by match to protein family HMM PF01909.
 
     0.769
ACN98377.1
Transposon, transposase; Identified by match to protein family HMM PF07282; match to protein family HMM TIGR01766.
       0.527
ACN99218.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.454
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.454
ACN98779.1
Exopolyphosphatase; Identified by match to protein family HMM PF02541.
       0.412
Your Current Organism:
Sulfurihydrogenibium azorense
NCBI taxonomy Id: 204536
Other names: Aquificaceae bacterium Az-Fu1, S. azorense Az-Fu1, Sulfurihydrogenibium azorense Az-Fu1, Sulfurihydrogenibium azorense str. Az-Fu1, Sulfurihydrogenibium azorense strain Az-Fu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.