STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hynL[Ni/Fe] hydrogenase, large subunit; Identified by match to protein family HMM PF00374; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (578 aa)    
Predicted Functional Partners:
ACN99488.1
Ni-Fe hydrogenase, cytochrome B subunit; Identified by match to protein family HMM PF01292.
 
 
 0.997
ACN98299.1
Quinone-reactive Ni/Fe-hydrogenase small subunit; Identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391.
 
 
 0.995
hybA
Hydrogenase-2, small subunit.
 
 
 0.984
ACN98278.1
Ni,Fe-hydrogenase large subunit; Identified by match to protein family HMM PF00374.
 
  
 
0.952
ACN98947.1
Ni/Fe hydrogenase, expression/formation protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072.
 
 
 0.945
hypA
Hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.931
ACN99674.1
Putative [NiFe] hydrogenase, delta subunit; Identified by match to protein family HMM PF01058.
  
 
 0.817
hypD
Hydrogenase expression/formation protein HypD; Identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075.
 
 
 0.797
ACN98774.1
Succinate dehydrogenase, subunit C; Identified by match to protein family HMM PF02754.
  
 
 0.754
hypB
Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.
 
  
 0.717
Your Current Organism:
Sulfurihydrogenibium azorense
NCBI taxonomy Id: 204536
Other names: Aquificaceae bacterium Az-Fu1, S. azorense Az-Fu1, Sulfurihydrogenibium azorense Az-Fu1, Sulfurihydrogenibium azorense str. Az-Fu1, Sulfurihydrogenibium azorense strain Az-Fu1
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