Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACN98586.1 | ACN99584.1 | SULAZ_0778 | SULAZ_0777 | Transposase, OrfB family; Identified by match to protein family HMM TIGR01765; match to protein family HMM TIGR01766. | Hypothetical protein; Identified by Glimmer3; putative. | 0.456 |
ACN98586.1 | leuC | SULAZ_0778 | SULAZ_0779 | Transposase, OrfB family; Identified by match to protein family HMM TIGR01765; match to protein family HMM TIGR01766. | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.678 |
ACN99584.1 | ACN98586.1 | SULAZ_0777 | SULAZ_0778 | Hypothetical protein; Identified by Glimmer3; putative. | Transposase, OrfB family; Identified by match to protein family HMM TIGR01765; match to protein family HMM TIGR01766. | 0.456 |
ACN99584.1 | leuC | SULAZ_0777 | SULAZ_0779 | Hypothetical protein; Identified by Glimmer3; putative. | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.408 |
ACN99584.1 | metF | SULAZ_0777 | SULAZ_0776 | Hypothetical protein; Identified by Glimmer3; putative. | 5,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; Belongs to the methylenetetrahydrofolate reductase family. | 0.509 |
leuC | ACN98586.1 | SULAZ_0779 | SULAZ_0778 | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | Transposase, OrfB family; Identified by match to protein family HMM TIGR01765; match to protein family HMM TIGR01766. | 0.678 |
leuC | ACN99584.1 | SULAZ_0779 | SULAZ_0777 | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | Hypothetical protein; Identified by Glimmer3; putative. | 0.408 |
leuC | metF | SULAZ_0779 | SULAZ_0776 | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 5,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; Belongs to the methylenetetrahydrofolate reductase family. | 0.417 |
metF | ACN99584.1 | SULAZ_0776 | SULAZ_0777 | 5,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; Belongs to the methylenetetrahydrofolate reductase family. | Hypothetical protein; Identified by Glimmer3; putative. | 0.509 |
metF | leuC | SULAZ_0776 | SULAZ_0779 | 5,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; Belongs to the methylenetetrahydrofolate reductase family. | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.417 |