STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN99585.1Outer membrane lipoprotein carrier protein LolA; Identified by match to protein family HMM PF03548. (201 aa)    
Predicted Functional Partners:
ACN98731.1
Lipoprotein releasing system, transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687.
 
 
 
 0.809
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
 
 0.778
ACN98484.1
Lipoprotein-releasing system ATP-binding protein LolD; Identified by match to protein family HMM PF00005.
   
 
 0.778
ACN98587.1
Putative thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068.
       0.774
ACN99401.1
ABC-type transport system; Identified by match to protein family HMM PF02687.
   
 
 0.773
ACN98993.1
N-acetylmuramoyl-L-alanine amidase AmiC; Identified by match to protein family HMM PF01520.
  
 
   0.765
ACN99562.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.762
ACN98578.1
Conserved hypothetical protein.
       0.762
ACN98336.1
Crispr-associated cxxc_cxxc protein Cst1; Identified by match to protein family HMM TIGR01908.
 
     0.671
cas_1
Crispr-associated protein Cas6; Identified by match to protein family HMM PF01881; match to protein family HMM TIGR01877.
 
     0.665
Your Current Organism:
Sulfurihydrogenibium azorense
NCBI taxonomy Id: 204536
Other names: Aquificaceae bacterium Az-Fu1, S. azorense Az-Fu1, Sulfurihydrogenibium azorense Az-Fu1, Sulfurihydrogenibium azorense str. Az-Fu1, Sulfurihydrogenibium azorense strain Az-Fu1
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