STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN99798.1[pyruvate formate-lyase]-activating enzyme; Identified by match to protein family HMM PF04055. (340 aa)    
Predicted Functional Partners:
ACN99406.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296.
 
     0.801
ACN98771.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01875; similarity to protein aq_890; Belongs to the MEMO1 family.
 
     0.800
ACN99595.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.552
ACN98662.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
  
 0.537
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.447
rpmA
Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.
       0.434
ACN99592.1
Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171.
  
  
 0.413
ACN98526.1
4Fe-4S ferredoxin, iron-sulfur binding; Identified by match to protein family HMM PF00037.
   
  
 0.405
Your Current Organism:
Sulfurihydrogenibium azorense
NCBI taxonomy Id: 204536
Other names: Aquificaceae bacterium Az-Fu1, S. azorense Az-Fu1, Sulfurihydrogenibium azorense Az-Fu1, Sulfurihydrogenibium azorense str. Az-Fu1, Sulfurihydrogenibium azorense strain Az-Fu1
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