STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF39727.1ABC efflux pump, inner membrane subunit. (420 aa)    
Predicted Functional Partners:
ABF42325.1
ABC transporter, ATPase subunit.
   0.922
ABF39372.1
ABC transporter, ATPase subunit.
 
   0.875
ABF39377.1
ABC transporter, ATPase subunit.
 
   0.837
ABF42532.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.816
ABF39726.1
ABC efflux pump, inner membrane subunit.
 
    
0.815
ABF42324.1
Secretion protein HlyD.
 
    0.801
ABF43022.1
ABC transporter, ATPase subunit.
 
   0.795
ABF40831.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.785
ABF41828.1
ABC transporter, ATPase subunit.
   0.773
ABF40868.1
ABC transporter, ATPase subunit.
   0.751
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.