STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF39862.1Hypothetical protein. (1060 aa)    
Predicted Functional Partners:
ABF39864.1
AAA ATPase.
 
  
 0.947
ABF39865.1
Conserved hypothetical protein.
 
     0.946
ABF39859.1
Conserved hypothetical protein.
 
 
   0.933
ABF39860.1
Conserved hypothetical protein.
 
 
   0.932
ABF39858.1
Conserved hypothetical protein.
 
  
 0.924
ABF39861.1
Conserved hypothetical protein.
 
     0.923
ABF39856.1
Conserved hypothetical protein.
 
 
   0.912
ABF39854.1
Conserved hypothetical protein.
 
 
   0.911
ABF39855.1
Conserved hypothetical protein.
 
 
   0.911
ABF39852.1
Hypothetical protein.
 
   0.908
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.