STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF40692.1Two component transcriptional regulator, LuxR family. (208 aa)    
Predicted Functional Partners:
ABF40693.1
Periplasmic sensor signal transduction histidine kinase.
 
   0.959
ABF40455.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.859
ABF43289.1
GAF sensor signal transduction histidine kinase.
 
 
 0.859
ABF42088.1
PAS sensor signal transduction histidine kinase.
 
 0.844
ABF43063.1
Histidine kinase.
 
   0.829
ABF39976.1
Putative signal transduction histidine kinase.
 
   0.828
ABF39826.1
PAS/PAC sensor signal transduction histidine kinase.
   
 0.797
ABF40691.1
Integrin-like protein.
  
    0.778
ABF41443.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.753
ABF42749.1
Putative signal transduction histidine kinase.
 
 
 0.749
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.