STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF41215.1Heavy metal translocating P-type ATPase. (846 aa)    
Predicted Functional Partners:
ABF42365.1
Multicopper oxidase, type 3.
 
  
 0.662
ABF41674.1
Rieske (2Fe-2S) oxidoreductase.
   
 
 0.648
ABF39804.1
Vitamin K epoxide reductase.
 
 
 0.615
ABF42348.1
Rieske (2Fe-2S) oxidoreductase.
   
 
 0.606
ABF43476.1
Cation diffusion facilitator family transporter.
  
  
 0.574
ABF41214.1
Conserved hypothetical protein.
       0.536
ABF40127.1
Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
 
   
 0.531
ABF41246.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.528
ABF40498.1
Multicopper oxidase, type 2.
  
  
 0.518
ABF41129.1
Multicopper oxidase, type 2.
  
  
 0.518
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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