STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF41234.1Response regulator receiver protein. (131 aa)    
Predicted Functional Partners:
ABF42504.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.918
ABF41896.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.905
ABF43059.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.887
ABF40592.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.870
ABF40815.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 
 0.840
ABF39479.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.839
ABF42358.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.836
ABF42063.1
Periplasmic sensor signal transduction histidine kinase.
  
   0.825
ABF39755.1
Periplasmic sensor signal transduction histidine kinase.
  
   0.824
ABF41782.1
Histidine kinase.
  
   0.822
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.