STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF42358.1Multi-sensor signal transduction histidine kinase. (970 aa)    
Predicted Functional Partners:
ABF41412.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.980
ABF41400.1
Multi-sensor signal transduction histidine kinase.
 
 
0.972
ABF42209.1
Response regulator receiver protein.
  
 
 0.970
ABF42015.1
Multi-sensor hybrid histidine kinase.
 
 
0.936
ABF42357.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
 
 
 
 0.875
ABF43059.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.858
ABF40813.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.840
ABF40815.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 
0.840
ABF41234.1
Response regulator receiver protein.
 
 
 0.836
ABF40971.1
Response regulator receiver protein.
 
 
 0.834
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.