STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF42675.1Uncharacterized conserved protein UCP028846. (470 aa)    
Predicted Functional Partners:
ABF39519.1
Alpha-1,2-mannosidase, putative.
    0.912
ABF42676.1
NmrA-like protein.
 
     0.746
ABF39965.1
Glycosyl hydrolase, family 88.
  
     0.631
ABF39905.1
Alpha-L-fucosidase.
 
     0.533
ABF39649.1
Glycosyl hydrolases 38-like protein.
 
    0.529
ABF40361.1
Glycoside hydrolase family 2, sugar binding protein.
 
     0.497
ABF42677.1
Hypothetical protein.
       0.496
ABF39322.1
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.467
ABF39644.1
Mannose-6-phosphate isomerase-like protein.
 
     0.460
ABF42979.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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