STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF43366.1Hypothetical protein. (496 aa)    
Predicted Functional Partners:
ABF42389.1
Hypothetical protein.
  
     0.739
ABF42313.1
Hypothetical protein.
  
     0.704
ABF43367.1
Hypothetical protein.
       0.702
ABF39401.1
Hypothetical protein.
  
     0.699
ABF42071.1
Hypothetical protein.
  
     0.698
ABF39838.1
Hypothetical protein.
  
     0.695
ABF40935.1
Response regulator receiver protein.
  
     0.691
ABF42273.1
Hypothetical protein.
  
    0.684
ABF42692.1
Hypothetical protein.
  
     0.681
ABF42390.1
Integrase, catalytic region.
  
    0.668
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.